Interactive analyis of phosphoproteomics data

Phosphomatics provides a suite of tools for the downstream analysis of mass spectrometry-based global phosphoproteomics data. Our goal is to provide statistical and biological context for the results generated by mass spectrometry and analysed by quantitative search software

Begin Analysis

Begin a new analysis by uploading local data

Return to a previous analysis by supplying your unique data set ID

View an example analysis using data derived from Francavilla et al (2017). Here, an ovarian cancer cell line were treated in triplicate with either THZi1 (a CDK7 inhibitor), U0126 (a MEK inhibitor) or control.


Click 'view example' above to be taken directly to the processed example results. If you'd like to view the data upload wizard, you can download our example data and example data parameter file


View the Phosphomatics documentation
Phosphomatics citations
Phosphomatics change log
Phosphomatics License


If you experience problems with this website, please contact our developers here.

Feature requests

We're always trying to improve our service! If you have ideas for new features or improvements, please let us know!

Cookies and analytics

Phosphomatics uses cookies to allow you to return to previous analyses. We also use Google Analytics to measure usage of this website.