• 1
  • 2
  • 3
  • 4
  • 5
  • 6
  • 7
  • 8
  • 9
Experimental Data File

Upload the data file containing phosphorylation sites and their relative abundances. Phosphomatics is directly compatible with the 'Phospho (STY) sites.txt' file produced by MaxQuant and can be configured to accept data from a wide range of other common proteomics raw data analysis software.

Data file
Optional - Parameter File

Optionally, upload an existing phosphomatics parameter file. This is useful if you'd like to repeat a pervious analysis.

Parameter file
Optional - Annotation Data File

Optionally, a file containing protein identifications from global protein samples (i.e. not phosphopeptide-enriched peptides) can be uploaded. This can be used to confirm the presence of putative upstream kinases in a sample.

Annotation file
Data Source
Raw data is from FragPipe workflow.